Timeseries plots for MyConnectome dataset

Code available at: https://github.com/poldrack/myconnectome/blob/master/myconnectome/timeseries/Make_timeseries_plots.Rmd

This code generates timeseries plots for each variable, and performs a test for linear and polynomial trends.

Behavioral variables

FDR-corrected p-values for trends

mean var(resid) Linear trend (p-val) Poly trend (p-val)
panas.positive 20.4761029 29.3387249 0.8781553 0.8781553
panas.negative 2.0220588 4.6712623 0.8781553 0.3273336
panas.fatigue 4.2169118 10.6101539 0.8599373 0.9659945
afterscan.Anxietyduringscan 1.9013605 1.0529580 0.8781553 0.8781553
afterscan.diastolic 73.3146259 31.2051379 0.2053573 0.8781553
afterscan.pulse 71.1587302 28.5280870 0.8781553 0.0204432
afterscan.systolic 119.5306122 71.7413532 0.0072041 0.8781553
morning.Sleepquality 2.8071672 0.6481554 0.1698373 0.8781553
morning.Soreness 3.5921502 0.5708564 0.0204432 0.8781553
prevevening.Alcohol 3.7913424 0.4982084 0.1763964 0.8781553
prevevening.Guthealth 2.8793774 0.4324978 0.8781553 0.8674391
prevevening.Psoriasisseverity 3.8171206 0.6141190 0.9659945 0.8020192
prevevening.Stress 3.0000000 0.6766762 0.9659945 0.2221560
prevevening.Timespentoutdoors 0.7491797 0.3584662 0.1226403 0.8020192
temp.mean 68.8065878 24.6761793 0.8781553 0.7082041
email.LIWCcdi 15.6411810 3.0420941 0.9659945 0.8781553
email.LIWCnegemo 1.0522921 0.0898830 0.8781553 0.8781553
email.LIWCposemo 5.0308607 0.2507882 0.8781553 0.8781553
zeo.zq 85.8042169 35.7165270 0.0000022 0.0009720

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Network measures

FDR-corrected p-values for trends

mean var(resid) Linear trend (p-val) Poly trend (p-val)
modularity_weighted 0.4722144 0.0005051 0.6989363 0.9167402
eff_weighted 0.2238043 0.0000629 0.2629514 0.5930804
meancorrsim 0.8199131 0.0010510 0.2629514 0.2629514

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Within-network connectivity

FDR-corrected p-values for trends

mean var(resid) Linear trend (p-val) Poly trend (p-val)
1:Default 0.3645777 0.0022847 0.1466900 0.3539163
2:Visual_2 0.3785286 0.0027911 0.0028706 0.2802009
3:Fronto_Parietal 0.3297280 0.0018705 0.2802009 0.6534663
4.5:Visual_1 0.4262607 0.0049901 0.9776697 0.0028706
5:Dorsal_Attention 0.4506383 0.0056583 0.1610178 0.0210727
7:Ventral_Attention 0.3260388 0.0022297 0.1930675 0.0121949
8:Salience 0.4968170 0.0030996 0.9776697 0.1610178
9:Cingulo_opercular 0.3416564 0.0017455 0.9776697 0.2038124
10:Somatomotor 0.3803310 0.0083758 0.2802009 0.0133057
11.5:Fronto_Parietal_2 0.3244550 0.0029389 0.6534663 0.1610178
15:Medial_Parietal 0.5348551 0.0041720 0.8542290 0.5067178
16:Parieto_Occipital 0.4737440 0.0054481 0.9920658 0.3081457

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